Difference between revisions of "Regtools"
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| − | [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]] | + | [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]][[Category:Genomics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|regtools}} | |{{#vardefine:app|regtools}} | ||
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<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 21:41, 21 August 2022
Description
Regtools is a set of tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context.
Environment Modules
Run module spider regtools to find out what environment modules are available for this application.
System Variables
- HPC_REGTOOLS_DIR - installation directory