Difference between revisions of "Pyfasta"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pyfasta}} |{{#vardefine:url|https://pypi.python.org/pypi...")
 
 
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{|<!--CONFIGURATION: REQUIRED-->
 
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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 19:58, 21 August 2022

Description

pyfasta website  

Fast, memory-efficient, pythonic (and command-line) access to fasta sequence files.

Required Modules

Serial

  • gcc/5.2.0
  • python/2.7.10
  • pyfasta

System Variables

  • HPC_PYFASTA_DIR - installation directory