Difference between revisions of "Pandaseq"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:BioinformaticsCategory:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pandaseq}} |{{#vardefine:url| https://github.com/neufel...") |
|||
| (4 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|pandaseq}} | |{{#vardefine:app|pandaseq}} | ||
| Line 21: | Line 21: | ||
<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
| − | |||
| − | < | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:08, 19 August 2022
Description
PANDASEQ is a PAired-eND Assembler for DNA sequences.
Environment Modules
Run module spider pandaseq to find out what environment modules are available for this application.
System Variables
- HPC_PANDASEQ_DIR - installation directory