IGV: Difference between revisions
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Created page with "Category:SoftwareCategory:BiologyCategory:BioinformaticsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|igv}} |{{#vardefine:url|http://software..." |
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[[Category:Software]][[Category:Biology]][[Category: | [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Phylogenetics]] | ||
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|igv}} | |{{#vardefine:app|igv}} | ||
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<!--Modules--> | <!--Modules--> | ||
== | ==Environment Modules== | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |||
< | |||
==System Variables== | ==System Variables== | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:42, 15 August 2022
Description
The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets. It supports a wide variety of data types, including array-based and next-generation sequence data, and genomic annotations.
Environment Modules
Run module spider igv to find out what environment modules are available for this application.
System Variables
- HPC_IGV_DIR - installation directory
- HPC_IGV_BIN - executable directory