Difference between revisions of "IAssembler"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:39, 15 August 2022
Description
iassembler website
iAssembler is a standalone package to assemble ESTs generated using Sanger and/or Roche-454 pyrosequencing technologies into contigs. The pipeline gives much higher accuracy in EST assembly than other existing assemblers by employing an iterative assembly strategy and automated error corrections of mis-assemblies.
Environment Modules
Run module spider iassembler to find out what environment modules are available for this application.
System Variables
- HPC_IASSEMBLER_DIR - installation directory
Citation
If you publish research that uses iassembler you have to cite it as follows: