Difference between revisions of "Grf"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|grf}} |{{#vardefine:url|https://github.com/bioinfolabmu/GenericRepeatFinder}} <!--...") |
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| − | [[Category:Software]][[Category:biology]] | + | [[Category:Software]][[Category:biology]][[Category:Genomics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|grf}} | |{{#vardefine:app|grf}} | ||
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 17:21, 15 August 2022
Description
Generic Repeat Finder (GRF) is a program for detecting terminal inverted repeats (TIRs), terminal direct repeats (TDRs), interspersed repeats, miniature inverted repeat transposable elements (MITEs), and long terminal repeat (LTR) transposons in genomes.
If you have any question or comment, please contact Dr. Chun Liang (liangc@miamioh.edu).
Environment Modules
Run module spider grf to find out what environment modules are available for this application.
System Variables
- HPC_GRF_DIR - installation directory