Difference between revisions of "GeneSeqer"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|geneseqer}} |{{#vardefine:url|http://brendelgroup.org/...") |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:58, 12 August 2022
Description
GeneSeqer is a spliced alignment tool.
Environment Modules
Run module spider geneseqer to find out what environment modules are available for this application.
System Variables
- HPC_GENESEQER_DIR - installation directory
Citation
If you publish research that uses geneseqer you have to cite it as follows:
Brendel, V., Xing, L. & Zhu, W. (2004) Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus. Bioinformatics 20, 1157-1169.