EPACTS: Difference between revisions

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Created page with "Category:SoftwareCategory:BiologyCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|epacts}} |{{#vardefine:url|http://..."
 
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[[Category:Software]][[Category:Biology]][[Category:Bioinformatics]][[Category:Genomics]]
[[Category:Software]][[Category:Biology]][[Category:Biology]][[Category:Genomics]]
{|<!--CONFIGURATION: REQUIRED-->
{|<!--CONFIGURATION: REQUIRED-->
|{{#vardefine:app|epacts}}
|{{#vardefine:app|epacts}}
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<!--Modules-->
<!--Modules-->
==Required Modules==
==Environment Modules==
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
* {{#var:app}}
<!--
===Parallel (OpenMP)===
* intel
* {{#var:app}}
===Parallel (MPI)===
* intel
* openmpi
* {{#var:app}}
-->
==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
<!--Configuration-->
<!--Configuration-->
{{#if: {{#var: conf}}|==Configuration==
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 18:52, 12 August 2022

Description

epacts website  

EPACTS (Efficient and Parallelizable Association Container Toolbox) is a versatile software pipeline to perform various statistical tests for identifying genome-wide association from sequence data through a user-friendly interface, both to scientific analysts and to method developers.

Environment Modules

Run module spider epacts to find out what environment modules are available for this application.

System Variables

  • HPC_EPACTS_DIR - installation directory