BLASR: Difference between revisions
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m Text replacement - "#uppercase" to "uc" |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:Software]][[Category: | [[Category:Software]][[Category:Biology]][[Category:NGS]] | ||
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|blasr}} | |{{#vardefine:app|blasr}} | ||
| Line 20: | Line 20: | ||
BLASR is the PacBio® long read aligner. | BLASR is the PacBio® long read aligner. | ||
<!--Modules--> | <!--Modules--> | ||
== | ==Environment Modules== | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |||
< | |||
==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
| Line 67: | Line 57: | ||
<!--Turn the Table of Contents and Edit paragraph links ON/OFF--> | <!--Turn the Table of Contents and Edit paragraph links ON/OFF--> | ||
__NOTOC____NOEDITSECTION__ | __NOTOC____NOEDITSECTION__ | ||
Latest revision as of 18:17, 12 August 2022
Description
BLASR is the PacBio® long read aligner.
Environment Modules
Run module spider blasr to find out what environment modules are available for this application.
System Variables
- HPC_BLASR_DIR - installation directory