BLASR: Difference between revisions

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Created page with "Category:SoftwareCategory:BioinformaticsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|blasr}} |{{#vardefine:url|https://github.com/PacificBioscie..."
 
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[[Category:Software]][[Category:Bioinformatics]][[Category:NGS]]
[[Category:Software]][[Category:Biology]][[Category:NGS]]
{|<!--CONFIGURATION: REQUIRED-->
{|<!--CONFIGURATION: REQUIRED-->
|{{#vardefine:app|blasr}}
|{{#vardefine:app|blasr}}
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BLASR is the PacBio® long read aligner.
BLASR is the PacBio® long read aligner.
<!--Modules-->
<!--Modules-->
==Required Modules==
==Environment Modules==
===Serial===
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
* {{#var:app}}
<!--
===Parallel (OpenMP)===
* intel
* {{#var:app}}
===Parallel (MPI)===
* intel
* openmpi
* {{#var:app}}
-->
==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
<!--Configuration-->
<!--Configuration-->
{{#if: {{#var: conf}}|==Configuration==
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 18:17, 12 August 2022

Description

blasr website  

BLASR is the PacBio® long read aligner.

Environment Modules

Run module spider blasr to find out what environment modules are available for this application.

System Variables

  • HPC_BLASR_DIR - installation directory