Bamtools: Difference between revisions
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<!--Modules--> | <!--Modules--> | ||
== | ==Environment Modules== | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |||
==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
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WRITE CITATION HERE | WRITE CITATION HERE | ||
|}} | |}} | ||
Revision as of 16:27, 10 June 2022
Description
BamTools is a project that provides both a C++ API and a command-line toolkit for reading, writing, and manipulating BAM (genome alignment) files.
Environment Modules
Run module spider bamtools to find out what environment modules are available for this application.
System Variables
- HPC_BAMTOOLS_DIR - installation directory
Additional tools
We also provide small tools that depend on bamtools or are built against it within this module.
- bamaddrg (2012-01-27 build against bamtools 0.9.4).