Randfold: Difference between revisions

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<!--Modules-->
<!--Modules-->
==Required Modules==
==Environment Modules==
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
* gcc/5.2.0
* {{#var:app}}
<!--
===Parallel (OpenMP)===
* intel
* {{#var:app}}
===Parallel (MPI)===
* intel
* openmpi
* {{#var:app}}
-->
==System Variables==
==System Variables==
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory

Revision as of 15:34, 10 June 2022

Description

randfold website  

Randfold compute the probability that, for a given RNA sequence, the Minimum Free Energy (MFE) of the secondary structure is different from a distribution of MFE computed with random sequences.

Environment Modules

Run module spider randfold to find out what environment modules are available for this application.

System Variables

  • HPC_RANDFOLD_DIR - installation directory