Difference between revisions of "Je"
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(Created page with "Category:SoftwareCategory:BiologyCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|je}} |{{#vardefine:url|https://git.embl.de/grp-gbcs/Je}} <!--CONFI...") |
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 14:44, 10 June 2022
Description
Je tool suite for de-multiplexing and PCR duplicate removal of NGS datasets.
Environment Modules
Run module spider je to find out what environment modules are available for this application.
System Variables
- HPC_JE_DIR - installation directory