Difference between revisions of "BALi-Phy"

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BAli-Phy is software by Ben Redelings that estimates multiple sequence
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BAli-Phy is software by Ben Redelings that estimates multiple sequence alignments and evolutionary trees from DNA, amino acid, or codon sequences. It uses likelihood-based evolutionary models of substitutions and insertions and deletions to place gaps. It has been used in published analyses on data sets up to 117 taxa.
    alignments and evolutionary trees from DNA, amino acid, or codon sequences. It
 
    uses likelihood-based evolutionary models of substitutions and insertions and
 
    deletions to place gaps. It has been used in published analyses on data sets up
 
    to 117 taxa.
 
  
 
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Revision as of 17:10, 23 May 2022

Description

BALi-Phy website  

BAli-Phy is software by Ben Redelings that estimates multiple sequence alignments and evolutionary trees from DNA, amino acid, or codon sequences. It uses likelihood-based evolutionary models of substitutions and insertions and deletions to place gaps. It has been used in published analyses on data sets up to 117 taxa.

Environment Modules

Run module spider BALi-Phy to find out what environment modules are available for this application.

System Variables

  • HPC_BALI-PHY_DIR - installation directory