Difference between revisions of "Vcftools"
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(Created page with "Category:SoftwareCategory:biologyCategory:bioinformaticsCategory:genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|vcftools}} |{{#vardefine:url|https...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:29, 6 December 2019
Description
VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to provide easily accessible methods for working with complex genetic variation data in the form of VCF files.
Environment Modules
Run module spider vcftools to find out what environment modules are available for this application.
System Variables
- HPC_VCFTOOLS_DIR - installation directory
- HPC_VCFTOOLS_BIN - executable directory