Difference between revisions of "TreeBreaker"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|treebreaker}} |{{#vardefine:url|https://github.com/ansar...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - exectuable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - exectuable directory
 +
* HPC_{{uc:{{#var:app}}}}_EXE - example directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:29, 6 December 2019

Description

treebreaker website  

TreeBreaker can infer the evolution of a discrete phenotype distribution on a phylogenetic tree, and divide the tree into segments where this distribution is constant.

Environment Modules

Run module spider treebreaker to find out what environment modules are available for this application.

System Variables

  • HPC_TREEBREAKER_DIR - installation directory
  • HPC_TREEBREAKER_BIN - exectuable directory
  • HPC_TREEBREAKER_EXE - example directory