Difference between revisions of "SparCC"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_LIB - library directory |
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
Revision as of 21:24, 6 December 2019
Description
SparCC is mainly used for calculating correlations in compositional data. It can also be used to calculate sample diversity, rank abundance plots, etc.
Required Modules
Serial
- python
- {{#lowercase:SparCC}}
System Variables
- HPC_SPARCC_DIR - installation directory
- HPC_SPARCC_BIN - executable directory
- HPC_SPARCC_LIB - library directory