Difference between revisions of "NanoPlot"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Plotting {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nanoplot}} |{{#vardefine:url|https://github.com/wdecoster/Nan...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:23, 6 December 2019
Description
Plotting tool for long read sequencing data and alignments.
Includes: NanoComp, NanoStat, NanoFilt, and NanoLyse.
Environment Modules
Run module spider nanoplot to find out what environment modules are available for this application.
System Variables
- HPC_NANOPLOT_DIR - installation directory
- HPC_NANOPLOT_BIN - executable directory