Difference between revisions of "MultiQC"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:CHiP-Seq {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|multiqc}} |{{#vardefine:url|https://github.com/ewels/MultiQC}...")
 
m (Text replacement - "#uppercase" to "uc")
Line 24: Line 24:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Revision as of 21:23, 6 December 2019

Description

multiqc website  

MultiQC is a tool to create a single report with interactive plots for multiple bioinformatics analyses across many samples.

Environment Modules

Run module spider multiqc to find out what environment modules are available for this application.

System Variables

  • HPC_MULTIQC_DIR - installation directory
  • HPC_MULTIQC_BIN - executable directory