Difference between revisions of "Megraft"
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Revision as of 21:22, 6 December 2019
Description
A software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes
Required Modules
Serial
- megraft
System Variables
- HPC_MEGRAFT_DIR - installation directory
Citation
If you publish research that uses megraft you have to cite it as follows:
Johan Bengtsson, Martin Hartmann, Martin Unterseher, Parag Vaishampayan, Kessy Abarenkov, Lisa Durso, Elisabeth M. Bik, James R. Garey, K. Martin Eriksson, R. Henrik Nilsson Published in Research in Microbiology. Volume 163, Issues 6–7 (2012), 407–412 doi: 10.1016/j.resmic.2012.07.001.
Validation
- Validate 4/5/2018