Intervene: Difference between revisions

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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_LIB - library directory
* HPC_{{uc:{{#var:app}}}}_LIB - library directory


<!--Configuration-->
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

intervene website  

Intervene: a tool for intersection and visualization of multiple genomic region and gene sets http://intervene.rtfd.io/

Environment Modules

Run module spider intervene to find out what environment modules are available for this application.

System Variables

  • HPC_INTERVENE_DIR - installation directory
  • HPC_INTERVENE_BIN - executable directory
  • HPC_INTERVENE_LIB - library directory




Citation

If you publish research that uses intervene you have to cite it as follows:

Khan A, Mathelier A. Intervene: a tool for intersection and visualization of multiple gene or genomic region sets. BMC Bioinformatics. 2017;18:287. doi: 10.1186/s12859-017-1708-7