Difference between revisions of "Grf"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|grf}} |{{#vardefine:url|https://github.com/bioinfolabmu/GenericRepeatFinder}} <!--...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:20, 6 December 2019
Description
Generic Repeat Finder (GRF) is a program for detecting terminal inverted repeats (TIRs), terminal direct repeats (TDRs), interspersed repeats, miniature inverted repeat transposable elements (MITEs), and long terminal repeat (LTR) transposons in genomes.
If you have any question or comment, please contact Dr. Chun Liang (liangc@miamioh.edu).
Environment Modules
Run module spider grf to find out what environment modules are available for this application.
System Variables
- HPC_GRF_DIR - installation directory