Difference between revisions of "BlobTools"

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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|blobtools}} |{{#vardefine:url|https://github.com/DRL/blobtools}} <!--CONFIGU...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_EXE - example directory
+
* HPC_{{uc:{{#var:app}}}}_EXE - example directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Revision as of 21:15, 6 December 2019

Description

blobtools website  

A modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

Environment Modules

Run module spider blobtools to find out what environment modules are available for this application.

System Variables

  • HPC_BLOBTOOLS_DIR - installation directory
  • HPC_BLOBTOOLS_BIN - executable directory
  • HPC_BLOBTOOLS_EXE - example directory




Citation

If you publish research that uses blobtools you have to cite it as follows:

Laetsch DR and Blaxter ML, 2017