Difference between revisions of "CNVnator"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:11, 6 December 2019

Description

cnvnator website  

A tool for CNV discovery and genotyping from depth-of-coverage by mapped reads.

Required Modules

Serial

  • gcc/5.2.0
  • cnvnator

System Variables

  • HPC_CNVNATOR_DIR - installation directory




Citation

If you publish research that uses cnvnator you have to cite it as follows:

Genome Res. 2011 Jun;21(6):974-84. doi: 10.1101/gr.114876.110.