Difference between revisions of "IAssembler"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Assembly {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|iassembler}} |{{#vardefine:url|http://bioinfo.bti.cornell.edu...") |
|||
| Line 10: | Line 10: | ||
|{{#vardefine:testing|}} <!--PROFILING--> | |{{#vardefine:testing|}} <!--PROFILING--> | ||
|{{#vardefine:faq|}} <!--FAQ--> | |{{#vardefine:faq|}} <!--FAQ--> | ||
| − | |{{#vardefine:citation|}} <!--CITATION--> | + | |{{#vardefine:citation|1}} <!--CITATION--> |
| − | |{{#vardefine:installation| | + | |{{#vardefine:installation|}} <!--INSTALLATION--> |
|} | |} | ||
<!--BODY--> | <!--BODY--> | ||
Revision as of 18:28, 20 January 2016
Description
iassembler website
iAssembler is a standalone package to assemble ESTs generated using Sanger and/or Roche-454 pyrosequencing technologies into contigs. The pipeline gives much higher accuracy in EST assembly than other existing assemblers by employing an iterative assembly strategy and automated error corrections of mis-assemblies.
Required Modules
Serial
- iassembler
System Variables
- HPC_{{#uppercase:iassembler}}_DIR - installation directory
Citation
If you publish research that uses iassembler you have to cite it as follows: