VT

From UFRC
Revision as of 19:58, 29 January 2016 by Maxprok (talk | contribs) (Created page with "Category:SoftwareCategory:Biology,Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|vt}} |{{#vardefine:url|http://genome.sph.umich.edu/wiki/Vt}}...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

vt website  

vt is a variant tool set that discovers short variants from Next Generation Sequencing data.

Required Modules

Serial

  • vt

System Variables

  • HPC_{{#uppercase:vt}}_DIR - installation directory




Citation

If you publish research that uses vt you have to cite it as follows:

Adrian Tan, Gonçalo R. Abecasis and Hyun Min Kang. Unified Representation of Genetic Variants. Bioinformatics (2015) 31(13): 2202-2204