VAST-TOOLS

From UFRC
Jump to navigation Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

Description

vast-tools website  

Vertebrate Alternative Splicing and Transcription Tools (VAST-TOOLS) is a toolset for profiling alternative splicing events in RNA-Seq data.

Environment Modules

Run module spider vast-tools to find out what environment modules are available for this application.

System Variables

  • HPC_VAST-TOOLS_DIR - installation directory

Additional Information

Two VASTDB databases provided by the project have been downloaded and installed into the default location

  • Hsa (vastdb.hsa.7.3.14, human)
  • Mmu (vastdb.mmu.7.3.14, mouse)