VAST-TOOLS

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Description

vast-tools website  

Vertebrate Alternative Splicing and Transcription Tools (VAST-TOOLS) is a toolset for profiling alternative splicing events in RNA-Seq data.

Required Modules

Serial

  • vast-tools

System Variables

  • HPC_VAST-TOOLS_DIR - installation directory

Additional Information

Two VASTDB databases provided by the project have been downloaded and installed into the default location

  • Hsa (vastdb.hsa.7.3.14, human)
  • Mmu (vastdb.mmu.7.3.14, mouse)




Validation

  • Validate 4/5/2018