VAST-TOOLS
Revision as of 20:15, 3 June 2015 by Moskalenko (talk | contribs)
Description
Vertebrate Alternative Splicing and Transcription Tools (VAST-TOOLS) is a toolset for profiling alternative splicing events in RNA-Seq data.
Required Modules
Serial
- vast-tools
System Variables
- HPC_{{#uppercase:vast-tools}}_DIR - installation directory
Additional Information
Two VASTDB databases provided by the project have been downloaded and installed into the default location
- Hsa (vastdb.hsa.7.3.14, human)
- Mmu (vastdb.mmu.7.3.14, mouse)