Difference between revisions of "VAST-TOOLS"
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==System Variables== | ==System Variables== | ||
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| − | + | Two VASTDB databases provided by the project have been downloaded and installed into the default location | |
| + | * Hsa (vastdb.hsa.7.3.14, human) | ||
| + | * Mmu (vastdb.mmu.7.3.14, mouse) | ||
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| + | =Validation= | ||
| + | * Validate 4/5/2018 | ||
Revision as of 21:29, 6 December 2019
Description
Vertebrate Alternative Splicing and Transcription Tools (VAST-TOOLS) is a toolset for profiling alternative splicing events in RNA-Seq data.
Required Modules
Serial
- vast-tools
System Variables
- HPC_VAST-TOOLS_DIR - installation directory
Additional Information
Two VASTDB databases provided by the project have been downloaded and installed into the default location
- Hsa (vastdb.hsa.7.3.14, human)
- Mmu (vastdb.mmu.7.3.14, mouse)
Validation
- Validate 4/5/2018