Difference between revisions of "VAST-TOOLS"
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Revision as of 20:47, 5 April 2018
Description
Vertebrate Alternative Splicing and Transcription Tools (VAST-TOOLS) is a toolset for profiling alternative splicing events in RNA-Seq data.
Required Modules
Serial
- vast-tools
System Variables
- HPC_{{#uppercase:vast-tools}}_DIR - installation directory
Additional Information
Two VASTDB databases provided by the project have been downloaded and installed into the default location
- Hsa (vastdb.hsa.7.3.14, human)
- Mmu (vastdb.mmu.7.3.14, mouse)
Validation
- Validate 4/5/2018