Difference between revisions of "UFRC Help and Documentation"

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(Replaced content with "Category:Wiki {{App Add Page}} To use type the lowercase app name that is the same as the app module name e.g. "foobarbaz" into the text box and click on the "APP Add...")
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[[Category:Wiki]]
Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] [http://www.hpc.ufl.edu High Performance Computing Center] Wiki. This site provides documentation for various software applications and hardware configurations provided by the UF HPC Center. Please submit a request in our [http://support.hpc.ufl.edu Support System] or send email to [mailto://support@hpc.ufl.edu HPC support].</span>
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{{App Add Page}}
=== Getting Started ===
 
{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 
|-
 
| scope="col" width="150" |
 
* [[Getting Started]]
 
* [[Training]]
 
* [[Frequently Asked Questions]]
 
| scope="col" width="150" |
 
* [[Getting Help]]
 
* [[Mailing Lists]]
 
| scope="col" width="150" |
 
* [[Policies]]
 
* [[Password | Changing your Password]]
 
* [[Samba Access]]
 
|-
 
|}
 
  
=== System Information ===
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To use type the lowercase app name that is the same as the app module name e.g. "foobarbaz" into the text box and click on the "APP Add Page" button.
{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 
|-
 
| scope="col" width="150" |
 
* [[Schedulers]]
 
* [[Job Submission Queues]]
 
* [[Sample Scripts | Sample Job Scripts]]
 
| scope="col" width="150" |
 
* [[Cluster Monitoring]]
 
* [[Operating Environment]]
 
* [[Node Performance]]
 
| scope="col" width="150" |
 
* [[Hardware Testing]]
 
|}
 
 
 
=== Software and Libraries ===
 
{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 
|-
 
| scope="col" width="150" |
 
* [[Installed Software]]
 
* [[Modules]]
 
* [[Galaxy]]
 
| scope="col" width="150" |
 
* [[Command List]]
 
* [[OpenMP]]
 
* [[OpenMPI]]
 
| scope="col" width="150" |
 
* [[Installing Perl Modules|Installing Perl Modules]]
 
* [[Compilers]]
 
* [[CUDA|CUDA Programming Guides]]
 
|}
 
 
 
=== Specific Research Areas ===
 
{|  cellpadding=10 width="100%" style="background-color: #FFF; border-color: #228B22; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 
|-
 
| width="150" | [[Biology|Biological Research Computing]]
 
| scope="col" width="150" |
 
| scope="col" width="150" |
 
|-
 
| scope="col" width="150" |
 
* [[Galaxy|Galaxy Genomics Framework]]
 
* [[BioCluster|Bio Cluster]]
 
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* [[BLASTDB|Blast Databases]]
 
* [[Transfer_NGS_Sequence_Data_to_HPC|Transfer data to HPC]]
 
| scope="col" width="150" |
 
* [[:Category:Bioinformatics|Installed software]]
 
* [[Collaborative Work]]
 
|-
 
|}
 

Revision as of 16:46, 10 August 2012


To use type the lowercase app name that is the same as the app module name e.g. "foobarbaz" into the text box and click on the "APP Add Page" button.