Difference between revisions of "UFRC Help and Documentation"

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__NOTOC__
 
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Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] [http://www.hpc.ufl.edu High Performance Computing Center] Wiki. This site provides documentation for various software applications and hardware configurations provided by the UF HPC Center. Please submit a request in our [http://support.hpc.ufl.edu Support System] or send email to [mailto://support@hpc.ufl.edu HPC support].</span>
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<!-- {{Note|Interactive Jobs in the GPU partition are limited to 6 hrs|news}} -->
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Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our [https://www.rc.ufl.edu main web site]. The information here is focused on particular applications, services, and usage examples. [https://support.rc.ufl.edu Provide Feedback].</span>
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{{Note|[[https://lists.ufl.edu/cgi-bin/wa?A0=HPC-ANNOUNCE-L HiPerGator News and Announcements]] |news}}
 
=== Getting Started ===
 
=== Getting Started ===
 
{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"  
 
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* [[Getting Started]]
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* '''[[Getting Started ]]'''
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* [[Policies]]
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* [[Quick Start Guide]]
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* [[Mailing Lists]]
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* [[New user training]]
 
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* [[Getting Help]]
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* '''[[Training|Training, Events, Videos]]'''
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* [[Frequently Asked Questions]]
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* [[Development_and_Testing|Interactive Development and Testing]]
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* [[Storage|Practical Storage Use]]
 
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* [[Samba Access]]
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* '''[[Get_Help|How To Get Help]]'''</span>
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* [[Password | Changing your Password]]
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* <span class="plainlinks">[https://support.rc.ufl.edu/enter_bug.cgi Submit a Support Request]</span>
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* [[AI Help|AI Help]]
 
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=== System Information ===
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=== Interfaces and Access===
 
{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 
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|-
 
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* [[Schedulers]]
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* [[Jupyter_Notebooks| Jupyter (Python, R)]]
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* [[Job Submission Queues]]
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* [[Galaxy|Galaxy Genomics Framework]]
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* [[Sample Scripts | Sample Job Scripts]]
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* [[GPU_Access|GPU Access]]
 
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* [[Cluster Monitoring]]
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* [[GUI Programs|Running GUI Apps]]
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* [[Operating Environment]]
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* [[Open OnDemand|OnDemand (Matlab, RStudio,...)]]
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* [[Node Performance]]
 
 
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* [[Hardware Testing]]
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* [[Authentication With MFA|Multi-Factor Authentication]]
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* [[SSH Multiplexing]]
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* [[Blocked Accounts]]
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=== Software and Libraries ===
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=== Scheduler ===
 
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* [[Installed Software]]
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* [[SLURM_Commands|SLURM Commands]]
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* [[Modules]]
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* [[Account_and_QOS_limits_under_SLURM|Account and QOS Limits Under SLURM]]
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* [[Galaxy]]
 
 
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* [[Command List]]
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* [[Large-Memory_SMP_Servers|Big Memory Partition]]
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* [[OpenMP]]
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* [[Available Node Features]]
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* [[OpenMPI]]
 
 
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* [[Installing Perl Modules|Installing Perl Modules]]
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* [[Sample_SLURM_Scripts|SLURM Job Script Examples]]
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* [[Compilers]]
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* [[SLURM_Job_Arrays|SLURM Job Arrays]]
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* [[CUDA|CUDA Programming Guides]]
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|}
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=== Software and Reference Data===
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|-
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* [[Applications|Installed Applications]]
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* [[UFRC_environment_module|HiPerGator ufrc Tools]]
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* [[Modules|Environment Modules System]]
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* [[Reference Data]]
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* [[AI Reference Datasets]]
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|-
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|}
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=== Transfer Data ===
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|-
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* [[Transfer Data]]
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* [[Globus]]
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* [[Samba Access]]
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|-
 
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=== Specific Research Areas ===
 
=== Specific Research Areas ===
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| width="150" | [[Biology|Biological Research Computing]]
 
 
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* [[Biology|Biocomputing]]
 
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* [[Galaxy|Galaxy Genomics Framework]]
 
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* [[BioCluster|Bio Cluster]]
 
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* [[BLASTDB|Blast Databases]]
 
 
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* [[:Category:Bioinformatics|Installed software]]
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* [[Nlp|Natural Language Processing]]
 
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Revision as of 16:10, 17 February 2022


Welcome to the University of Florida Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our main web site. The information here is focused on particular applications, services, and usage examples. Provide Feedback.

[HiPerGator News and Announcements]

Getting Started

Interfaces and Access

Scheduler

Software and Reference Data

Transfer Data

Specific Research Areas

Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=UFRC_Help_and_Documentation&oldid=22118"