Difference between revisions of "UFRC Help and Documentation"

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Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] [http://www.hpc.ufl.edu High Performance Computing Center] Wiki. This site provides documentation for various software applications and hardware configurations provided by the UF HPC Center. Please submit a request in our [http://support.hpc.ufl.edu Support System] or send email to [mailto://support@hpc.ufl.edu HPC support].</span>
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<!-- {{Note|Interactive Jobs in the GPU partition are limited to 6 hrs|news}} -->
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Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our [https://www.rc.ufl.edu main web site]. The information here is focused on particular applications, services, and usage examples. [https://support.rc.ufl.edu Provide Feedback].</span>
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{{Note|[[https://lists.ufl.edu/cgi-bin/wa?A0=HPC-ANNOUNCE-L HiPerGator News and Announcements]] |news}}
 
=== Getting Started ===
 
=== Getting Started ===
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|-
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* '''[[Getting Started ]]'''
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* [[Quick Start Guide]]
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* [[New user training]]
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* '''[[Training|Training, Events, Videos]]'''
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* [[Development_and_Testing|Interactive Development and Testing]]
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* [[Storage|Practical Storage Use]]
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* '''[[Get_Help|How To Get Help]]'''</span>
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* <span class="plainlinks">[https://support.rc.ufl.edu/enter_bug.cgi Submit a Support Request]</span>
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* [[AI Help|AI Help]]
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=== Interfaces and Access===
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* [[Getting Started]]
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* [[Jupyter_Notebooks| Jupyter (Python, R)]]
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* [[Policies]]
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* [[Galaxy|Galaxy Genomics Framework]]
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* [[GPU_Access|GPU Access]]
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* [[Getting Help]]
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* [[Frequently Asked Questions]]
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* [[GUI Programs|Running GUI Apps]]
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* [[Open OnDemand|OnDemand (Matlab, RStudio,...)]]
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* [[Samba Access]]
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* [[Password | Changing your Password]]
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* [[Authentication With MFA|Multi-Factor Authentication]]
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* [[SSH Multiplexing]]
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* [[Mailing Lists]]
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* [[Blocked Accounts]]
 
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=== System Information ===
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=== Scheduler ===
 
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* [[Schedulers]]
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* [[SLURM_Commands|SLURM Commands]]
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* [[Job Submission Queues]]
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* [[Account_and_QOS_limits_under_SLURM|Account and QOS Limits Under SLURM]]
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* [[Sample Scripts | Sample Submission Script]]
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* [[Large-Memory_SMP_Servers|Big Memory Partition]]
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* [[Cluster Monitoring]]
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* [[Available Node Features]]
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* [[Operating Environment]]
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* [[Node Performance]]
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* [[Sample_SLURM_Scripts|SLURM Job Script Examples]]
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* [[SLURM_Job_Arrays|SLURM Job Arrays]]
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* [[Hardware Testing]]
 
 
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=== Software and Libraries ===
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=== Software and Reference Data===
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|-
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* [[Applications|Installed Applications]]
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* [[UFRC_environment_module|HiPerGator ufrc Tools]]
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* [[Modules|Environment Modules System]]
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* [[Reference Data]]
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* [[AI Reference Datasets]]
 
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|}
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* [[Installed Software]]
 
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* [[Modules]]
 
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* [[Galaxy]]
 
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* [[Command List]]
 
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* [[OpenMP]]
 
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* [[OpenMPI]]
 
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* [[Installing Perl Modules|Installing Perl Modules]]
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=== Transfer Data ===
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* [[Compilers]]
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* [[CUDA|CUDA Programming Guides]]
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* [[Transfer Data]]
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* [[Globus]]
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* [[Samba Access]]
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=== Specific Research Areas ===
 
=== Specific Research Areas ===
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| [[Biology|Biological Research Computing]]
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|-
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* [[Biology|Biocomputing]]
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* [[Nlp|Natural Language Processing]]
 
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* [[Galaxy|Galaxy Genomics Framework]]
 
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* [[BLASTDB|Blast Databases]]
 
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* [[:Category:Bioinformatics|Installed biological computing software]]
 
 
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Revision as of 16:10, 17 February 2022


Welcome to the University of Florida Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our main web site. The information here is focused on particular applications, services, and usage examples. Provide Feedback.

[HiPerGator News and Announcements]

Getting Started

Interfaces and Access

Scheduler

Software and Reference Data

Transfer Data

Specific Research Areas

Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=UFRC_Help_and_Documentation&oldid=22118"