Difference between revisions of "UFRC Help and Documentation"

Revision as of 16:10, 17 February 2022

Welcome to the University of Florida Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our main web site. The information here is focused on particular applications, services, and usage examples. Provide Feedback.

[HiPerGator News and Announcements]

Getting Started

Interfaces and Access

Scheduler

@@ Line 1: / Line 1: @@
+[[Category:Docs]]
 __NOTOC__
-Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] [http://www.hpc.ufl.edu Research Computing] Wiki. This site provides documentation for various software applications and hardware configurations provided by the UF HPC Center. Please submit a request in our [http://support.hpc.ufl.edu Support System] or send email to [mailto://support@hpc.ufl.edu HPC support].</span>
+<!-- {{Note|Interactive Jobs in the GPU partition are limited to 6 hrs|news}} -->
+Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] Research Computing Help and Documentation site. General information, policies, and purchase request forms are on our [https://www.rc.ufl.edu main web site]. The information here is focused on particular applications, services, and usage examples. [https://support.rc.ufl.edu Provide Feedback].</span>
+{{Note|[[https://lists.ufl.edu/cgi-bin/wa?A0=HPC-ANNOUNCE-L HiPerGator News and Announcements]] |news}}
 === Getting Started ===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
 | scope="col" width="150" |
-* [[Getting Started]]
+* '''[[Getting Started ]]'''
+* [[Quick Start Guide]]
+* [[New user training]]
+| scope="col" width="150" |
+* '''[[Training|Training, Events, Videos]]'''
+* [[Development_and_Testing|Interactive Development and Testing]]
+* [[Storage|Practical Storage Use]]
+| scope="col" width="150" |
+* '''[[Get_Help|How To Get Help]]'''</span>
+* <span class="plainlinks">[https://support.rc.ufl.edu/enter_bug.cgi Submit a Support Request]</span>
+* [[AI Help|AI Help]]
+|-
+|}
+=== Interfaces and Access===
+{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
+|-
 | scope="col" width="150" |
-* [[Mailing Lists]]
+* [[Jupyter_Notebooks| Jupyter (Python, R)]]
-* [[Training]]
+* [[Galaxy|Galaxy Genomics Framework]]
+* [[GPU_Access|GPU Access]]
 | scope="col" width="150" |
-* [[Password | Changing your Password]]
+* [[GUI Programs|Running GUI Apps]]
-* [[Samba Access]]
+* [[Open OnDemand|OnDemand (Matlab, RStudio,...)]]
+| scope="col" width="150" |
+* [[Authentication With MFA|Multi-Factor Authentication]]
+* [[SSH Multiplexing]]
+* [[Blocked Accounts]]
 |-
 |}
-=== Software and Libraries ===
+=== Scheduler ===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
 | scope="col" width="150" |
-* [[Installed Software]]
+* [[SLURM_Commands|SLURM Commands]]
-* [[Modules]]
+* [[Account_and_QOS_limits_under_SLURM|Account and QOS Limits Under SLURM]]
-* [[Galaxy]]
+| scope="col" width="150" |
+* [[Large-Memory_SMP_Servers|Big Memory Partition]]
+* [[Available Node Features]]
+| scope="col" width="150" |
+* [[Sample_SLURM_Scripts|SLURM Job Script Examples]]
+* [[SLURM_Job_Arrays|SLURM Job Arrays]]
+|}
+=== Software and Reference Data===
+{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
+|-
+| scope="col" width="150" |
+* [[Applications|Installed Applications]]
+* [[UFRC_environment_module|HiPerGator ufrc Tools]]
 | scope="col" width="150" |
+* [[Modules|Environment Modules System]]
 | scope="col" width="150" |
-* [[Installing Perl Modules|Installing Perl Modules]]
+* [[Reference Data]]
-* [[CUDA|GPUs and CUDA]]
+* [[AI Reference Datasets]]
+|-
+|}
+=== Transfer Data ===
+{| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
+|-
+| scope="col" width="150" |
+* [[Transfer Data]]
+| scope="col" width="150" |
+* [[Globus]]
+| scope="col" width="150" |
+* [[Samba Access]]
+|-
 |}
@@ Line 31: / Line 84: @@
 {|  cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
-| width="150" | [[Biology|Biological Research Computing]]
 | scope="col" width="150" |
+* [[Biology|Biocomputing]]
 | scope="col" width="150" |
-|-
-| scope="col" width="150" |
-* [[Galaxy|Galaxy Genomics Framework]]
-* [[BioCluster|Bio Cluster]]
-|
-* [[BLASTDB|Blast Databases]]
-* [[Transfer_NGS_Sequence_Data_to_HPC|Data Transfer]]
 | scope="col" width="150" |
-* [[:Category:Bioinformatics|Bioinformatics Software]]
+* [[Nlp|Natural Language Processing]]
-* [[Sharing Files]]
 |-
 |}

Difference between revisions of "UFRC Help and Documentation"

Revision as of 16:10, 17 February 2022

Getting Started

Interfaces and Access

Scheduler

Software and Reference Data

Transfer Data

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