Difference between revisions of "UFRC Help and Documentation"

Revision as of 15:39, 18 October 2021

Effective October 18, 2021, Research Computing will require Multi-Factor Authentication for access to HiPerGator

The latest HiPerGator News and Announcements

Welcome to the University of Florida Research Computing Help and Documentation site. The information here is focused on particular applications, services, and usage examples and complements more general policies and information found on our main web site. It is used for information that changes more frequently and might become quickly dated or incorrect on the web site. This site is edited by individual UFRC staff members. If you find inaccuracies, errors, or omissions on this site please let us know.

Book an In-Person or Zoom support appointment.

Getting Started

Interfaces and Access

Scheduler

@@ Line 1: / Line 1: @@
 [[Category:Docs]]
 __NOTOC__
-{{Note|Interactive Jobs in the GPU partition are limited to 6 hrs|news}}
+{{Note | Effective October 18, 2021, Research Computing will require [[Authentication With MFA|Multi-Factor Authentication]] for access to HiPerGator|warn}}
+{{Note|[[:News:Latest|The latest HiPerGator News and Announcements]]|news}}
+<!-- {{Note|Interactive Jobs in the GPU partition are limited to 6 hrs|news}} -->
 Welcome to the <span class="plainlinks">[http://www.ufl.edu/ University of Florida] Research Computing Help and Documentation site. The information here is focused on particular applications, services, and usage examples and complements more general policies and information found on our [https://www.rc.ufl.edu main web site]. It is used for information that changes more frequently and might become quickly dated or incorrect on the web site. This site is edited by individual UFRC staff members. If you find inaccuracies, errors, or omissions on this site please [https://support.rc.ufl.edu let us know].</span>
+<span>[https://outlook.office365.com/owa/calendar/UFITResearchComputingSupport@uflorida.onmicrosoft.com/bookings/ Book an In-Person or Zoom support appointment.]</span>
 === Getting Started ===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
@@ Line 10: / Line 17: @@
 * [[Quick Start Guide]]
 * [[New user training]]
+| scope="col" width="150" |
 * [[Training|Training, Events and How-To Videos]]
-| scope="col" width="150" |
 * [[Development_and_Testing|Interactive Development and Testing]]
-* <span class="plainlinks">[https://www.rc.ufl.edu/about/procedures/storage/types/ Storage Types and Procedures]</span>
 * [[Storage|Practical Storage Use]]
 | scope="col" width="150" |
+* [[AI Help|AI Help]]
 * <span class="plainlinks">[https://support.rc.ufl.edu/enter_bug.cgi Submit a Support Request]</span>
-* [[Blocked Accounts]]
+* [[Support|All Support Options]]</span>
-* <span class="plainlinks">[https://www.rc.ufl.edu/services/teaching-support/ Teaching Support]</span>
 |-
 |}
-=== Interfaces ===
+=== Interfaces and Access===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
 | scope="col" width="150" |
-* [[Jupyter_Notebooks| Jupyter Notebooks]]
+* [[Jupyter_Notebooks| Jupyter (Python, R)]]
-* [[Open OnDemand]]
 * [[Galaxy|Galaxy Genomics Framework]]
+* [[GPU_Access|GPU Access]]
 | scope="col" width="150" |
-* [[GUI Programs]]
+* [[GUI Programs|Running GUI Apps]]
+* [[Open OnDemand|OnDemand (Matlab, RStudio,...)]]
+| scope="col" width="150" |
+* [[Authentication With MFA|Multi-Factor Authentication]]
+* [[SSH Multiplexing]]
+* [[Blocked Accounts]]
 |-
 |}
-=== Batch System ===
+=== Scheduler ===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
 | scope="col" width="150" |
 * [[SLURM_Commands|SLURM Commands]]
-* [[Using_Variables_in_SLURM_Jobs|Using Variables in SLURM]]
+* [[Account_and_QOS_limits_under_SLURM|Account and QOS Limits Under SLURM]]
-* [[SLURM_Job_Arrays|SLURM Job Arrays]]
 | scope="col" width="150" |
-* [[Account_and_QOS_limits_under_SLURM|Account and QOS Limits Under SLURM]]
 * [[Large-Memory_SMP_Servers|Big Memory Partition]]
 * [[Available Node Features]]
 | scope="col" width="150" |
-* [[Annotated_SLURM_Script|Annotated Job Script Walk-through]]
+* [[Sample_SLURM_Scripts|SLURM Job Script Examples]]
-* [[Sample_SLURM_Scripts|Sample SLURM Scripts]]
+* [[SLURM_Job_Arrays|SLURM Job Arrays]]
 |}
 === Software and Reference Data===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #0021A5; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
 | scope="col" width="150" |
 * [[Applications|Installed Applications]]
-* [[Reference Data]]
 * [[UFRC_environment_module|HiPerGator ufrc Tools]]
 | scope="col" width="150" |
 * [[Modules|Environment Modules System]]
-* [[Software Development]]
-* [[AI Support]]
 | scope="col" width="150" |
-* [[GPU_Access|GPU Access]]
+* [[Reference Data]]
-* [[Compilers|Available Compilers]]
+* [[AI Reference Datasets]]
+|-
 |}
-=== Data Transfer ===
+=== Transfer Data ===
 {| cellpadding=10 width="100%" style="background-color: #FFF; border-color: #FF4A00; border-style: solid; border-width: 3px 3px 3px 3px; color: #444444; vertical-align:top;"
 |-
@@ Line 84: / Line 90: @@
 |-
 | scope="col" width="150" |
-* [[Biology|Biological Research Computing]]
+* [[Biology|Biocomputing]]
-* [[:Category:Bioinformatics|Bioinformatics Software]]
 | scope="col" width="150" |
-* [[R|R (BioConductor)]]
-* [[BLASTDB|Blast Databases]]
 | scope="col" width="150" |
 * [[Nlp|Natural Language Processing]]
 |-
 |}

Difference between revisions of "UFRC Help and Documentation"

Revision as of 15:39, 18 October 2021

Getting Started

Interfaces and Access

Scheduler

Software and Reference Data

Transfer Data

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