Twinscan

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Description

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Twinscan/N-SCAN is WUSTL Brent lab's suite of software for gene-structure prediction. Twinscan is currently available for Mammals, Caenorhabditis (worm), Dicot plants, and Cryptococci. N-SCAN is available for human and Drosophila (fruitfly). Template:App Location

Available versions

  • 3.5
  • 4.1.2 (default)

Running the application using modules

To use twinscan with the environment modules system at HPC the following commands are available:

Get module information for twinscan:

$module spider twinscan

Load the default application module:

$module load twinscan

The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:

  • HPC_TWINSCAN_DIR - directory where twinscan is located.
  • HPC_TWINSCAN_BIN - executable directory
  • TWINSCAN - internal variable used by the Twinscan suite of software