Tuxedo

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Tuxedo is a combination of three different programs:

bowtie (Bowtie Website)
tophat (Tophat Website)
cufflinks (Cufflinks Website)

Installation Location

These programs are all installed here:

/apps/tuxedo/bowtie
/apps/tuxedo/tophat
/apps/tuxedo/cufflinks

Libraries

Samtools also needs to be installed on the system for tophat to work. They are currently installed here:

/apps/tuxedo/samtools-0.1.16

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