Tuxedo

Tuxedo is a combination of three different programs:

• Bowtie - Bowtie Website
• Bowtie2 - Bowtie Website
• Tophat - Tophat Website
• Cufflinks - Cufflinks Website

See the respective program page for usage information or run

module spider program

where program is bowtie, bowtie2, tophat, or cufflinks.

See individual software wiki pages for more details.