Difference between revisions of "Tuxedo"
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* [[Bowtie]] - [http://bowtie-bio.sourceforge.net/index.shtml Bowtie Website] | * [[Bowtie]] - [http://bowtie-bio.sourceforge.net/index.shtml Bowtie Website] | ||
| + | * [[Bowtie2]] - [http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Bowtie Website] | ||
* [[Tophat]] - [http://tophat.cbcb.umd.edu/ Tophat Website] | * [[Tophat]] - [http://tophat.cbcb.umd.edu/ Tophat Website] | ||
* [[Cufflinks]] - [http://cufflinks.cbcb.umd.edu/ Cufflinks Website] | * [[Cufflinks]] - [http://cufflinks.cbcb.umd.edu/ Cufflinks Website] | ||
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See the respective program page for usage information or run | See the respective program page for usage information or run | ||
module spider program | module spider program | ||
| − | where ''program'' is bowtie, tophat or cufflinks. | + | where ''program'' is bowtie, bowtie2, tophat, or cufflinks. |
See individual software wiki pages for more details. | See individual software wiki pages for more details. | ||
| + | =Validation= | ||
| + | * Validated 4/5/2018 | ||
Revision as of 18:52, 5 April 2018
Tuxedo is a combination of three different programs:
- Bowtie - Bowtie Website
- Bowtie2 - Bowtie Website
- Tophat - Tophat Website
- Cufflinks - Cufflinks Website
See the respective program page for usage information or run
module spider program
where program is bowtie, bowtie2, tophat, or cufflinks.
See individual software wiki pages for more details.
Validation
- Validated 4/5/2018