- r20110820, r20120125, r20120317 (EL5)
- trinity/r20120608 (default), both EL5 and EL6.
Using application with environment modules system
To use trinity with the environment modules system at HPC the following commands are available:
Get module information for trinity:
$module spider trinity
Load the default application module:
$module load trinity
The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:
- HPC_TRINITY_DIR - directory where trinity is located.
How To Run
To run Trinity after you load the module use the "Trinity.pl" perl script, or run_Trinity.sh shell script, which is particularly useful as the optional ALLPATHS-LG software is enabled at UF HPC.