Trinity

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Description

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Trinity contains three applications - Inchworm, Chrysalis, and Butterfly. Template:App Location

Available versions

  • r20110820
  • r20120125
  • r20120317 (default)

Using application with environment modules system

To use trinity with the environment modules system at HPC the following commands are available:

Get module information for trinity:

$module spider trinity

Load the default application module:

$module load trinity

The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:

  • HPC_TRINITY_DIR - directory where trinity is located.

How To Run

To run Trinity after you load the module use the "Trinity.pl" perl script, or run_Trinity.sh shell script, which is particularly useful if the optional ALLPATHS-LG software is enabled.