Difference between revisions of "Trilinos"

Latest revision as of 15:23, 19 August 2022

Description

The Trilinoslinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. A unique design feature of Trilinos is its focus on packages.

Environment Modules

Run module spider Trilinos to find out what environment modules are available for this application.

System Variables

HPC_TRILINOS_DIR - installation directory
HPC_TRILINOS_BIN - executable directory
HPC_TRILINOS_LIB - library directory
HPC_TRILINOS_INC - include file directory

Configuration

See the Trilinos_Configuration page for Trilinos configuration details.

@@ Line 1: / Line 1: @@
-[[Category:Software]][[Category:Mathematics]][[Category:]]
+[[Category:Software]][[Category:Math]]
 {|<!--Main settings - REQUIRED-->
 |{{#vardefine:app|Trilinos}}
 |{{#vardefine:url|http://trilinos.sandia.gov}}
 |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
-|{{#vardefine:conf|}} <!--Enable config wiki page link - {{#vardefine:conf|1}} = ON/conf|}} = OFF-->
+|{{#vardefine:conf|1}} <!--Enable config wiki page link - {{#vardefine:conf|1}} = ON/conf|}} = OFF-->
 |{{#vardefine:pbs|}} <!--Enable PBS script wiki page link-->
 |{{#vardefine:policy|}} <!--Enable policy section -->
@@ Line 16: / Line 16: @@
 {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
-Celera Assembler is scientific software for biological research. Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA from fragmentary data produced by whole-genome shotgun sequencing. Celera Assembler has enabled many advances in genomics, including the first whole genome shotgun sequence of a multi-cellular organism (Myers 2000) and the first diploid sequence of an individual human (Levy 2007). Celera Assembler was developed at Celera Genomics starting in 1999. It was released to SourceForge in 2004 as the wgs-assembler under the GNU General Public License. The pipeline revised for 454 data was named CABOG (Miller 2008).
+The Trilinoslinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. A unique design feature of Trilinos is its focus on packages.
 <!--Modules-->
-==Required Modules==
+==Environment Modules==
-[[Modules|modules documentation]]
+Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
-===Serial===
-*{{#var:app}}
 ==System Variables==
-* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
-* HPC_WGS_BIN - executable directory
+* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
+* HPC_{{uc:{{#var:app}}}}_LIB - library directory
+* HPC_{{uc:{{#var:app}}}}_INC - include file directory
 {{#if: {{#var: exe}}|==How To Run==
 WRITE INSTRUCTIONS ON RUNNING THE ACTUAL BINARY|}}