Difference between revisions of "Trans-ABySS"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|transabyss}} |{{#vardefine:url|https://github.com/bcgsc/...") |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
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If you publish research that uses {{#var:app}} you have to cite it as follows: | If you publish research that uses {{#var:app}} you have to cite it as follows: | ||
| − | [http://www.nature.com/nmeth/journal/v7/n11/full/nmeth.1517.html Robertson, G., et al. 2010. De novo assembly and analysis of RNA-seq data. Nature Methods 7, 909-912(2010) | + | [http://www.nature.com/nmeth/journal/v7/n11/full/nmeth.1517.html Robertson, G., et al. 2010. De novo assembly and analysis of RNA-seq data. Nature Methods 7, 909-912(2010)] |
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Latest revision as of 21:29, 6 December 2019
Description
De novo assembly of RNAseq data using ABySS
Required Modules
Serial
- transabyss
System Variables
- HPC_TRANSABYSS_DIR - installation directory
Citation
If you publish research that uses transabyss you have to cite it as follows:
