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traitrate website  

traitRate is a program for the detection of trait-dependent shifts in the rate of sequence evolution.

Sample input files are available at and in the "$HPC_TRAITRATE_EXE" directory.

Environment Modules

Run module spider traitrate to find out what environment modules are available for this application.

System Variables

  • HPC_TRAITRATE_DIR - installation directory


If you publish research that uses traitrate you have to cite it as follows:

Mayrose I and Otto SP. 2011. A Likelihood Method for Detecting Trait-Dependent Shifts in the Rate of Molecular Evolution. Mol Biol Evol. 28:781-791.