TraitRate

From UFRC
Revision as of 19:28, 29 January 2015 by Syngal (talk | contribs) (Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|traitrate}} |{{#vardefine:url|http://www.tau.ac.il/~itaymay/cp/traitRate/index.html}} <!--CONFIGURATIO...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

traitrate website  

traitRate is a program for the detection of trait-dependent shifts in the rate of sequence evolution.

Sample input files are available at http://www.tau.ac.il/~itaymay/cp/traitRate/index.html and in the "$HPC_TRAITRATE_EXE" directory.

Required Modules

Serial

  • traitrate

System Variables

  • HPC_{{#uppercase:traitrate}}_DIR - installation directory




Citation

If you publish research that uses traitrate you have to cite it as follows:

Mayrose I and Otto SP. 2011. A Likelihood Method for Detecting Trait-Dependent Shifts in the Rate of Molecular Evolution. Mol Biol Evol. 28:781-791.


Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=TraitRate&oldid=13201"