Difference between revisions of "Tiara"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Tiara}} |{{#vardefine:url|https://github.com/ibe-uw/tiara}} <!--CONFIGURATION:...")
 
 
Line 1: Line 1:
[[Category:Software]][[Category:sequencing]]
+
[[Category:Software]][[Category:Phylogenetics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|Tiara}}
 
|{{#vardefine:app|Tiara}}

Latest revision as of 16:36, 22 August 2022

Description

Tiara website  

Deep-learning-based approach for identification of eukaryotic sequences in the metagenomic data powered by PyTorch

Environment Modules

Run module spider Tiara to find out what environment modules are available for this application.

System Variables

  • HPC_TIARA_DIR - installation directory
  • HPC_TIARA_BIN - executable directory




Citation

If you publish research that uses Tiara you have to cite it as follows:

Michał Karlicki, Stanisław Antonowicz, Anna Karnkowska, Tiara: deep learning-based classification system for eukaryotic sequences, Bioinformatics, Volume 38, Issue 2, 15 January 2022, Pages 344–350