TEToolkit
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Description
TEtranscripts takes RNA-seq (and similar data) and annotates reads to both genes & transposable elements. It then performs differential analysis using DESeq.
Environment Modules
Run module spider tetoolkit to find out what environment modules are available for this application.
System Variables
- HPC_TETOOLKIT_DIR - installation directory
- HPC_TETOOLKIT_BIN - executable directory