TEToolkit
Revision as of 15:36, 10 June 2022 by Israel.herrera (talk | contribs)
Description
TEtranscripts takes RNA-seq (and similar data) and annotates reads to both genes & transposable elements. It then performs differential analysis using DESeq.
Environment Modules
Run module spider tetoolkit to find out what environment modules are available for this application.
System Variables
- HPC_TETOOLKIT_DIR - installation directory
- HPC_TETOOLKIT_BIN - executable directory