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squigglenet website  

SquiggleNet is a 1D ResNet based model to classify Oxford Nanopore raw electrical signals as target or non-target for Read-Until sequence enrichment or depletion.

Environment Modules

Run module spider squigglenet to find out what environment modules are available for this application.

System Variables

  • HPC_SQUIGGLENET_DIR - installation directory
  • HPC_SQUIGGLENET_BIN - executable directory